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Analysis of short interproton distances in proline peptides as a guide in the interpretation of nuclear overhauser effects

Ramakrishnan, Chandrashekharan and Sowdhamini, Ramanathan and Balaram, Padmanabhan (1988) Analysis of short interproton distances in proline peptides as a guide in the interpretation of nuclear overhauser effects. In: Collection of Czechoslovak Chemical Communications, 53 (11b). pp. 2801-2809.

Full text not available from this repository.
Official URL: http://cccc.uochb.cas.cz/53/11/2801/

Abstract

The conformational dependence of interproton distances in model proline peptides has been investigated in order to facilitate interpretation of the results of Nuclear Overhauser Effect (NOE) studies on such peptides. For this purpose two model systems, namely, Ac-Pro-NHMe and Ac-Pro-X-NHMe have been chosen and used. In the former, short interproton distances detectable in NOE experiments permit a clear distinction between conformations with Pro ψ = -300 (helical region) and those in which ψ is around 1200 (polyproline region). For the latter, the variation of distances between the protons of methyl amide and the Pro ring have been studied by superimposing on the Ramachandran map in the (φ3, ψ3) plane. The results show that β-turns and non-β-turn conformations can be readily distinguished from NOE data and such long range NOEs should be detectable for specific non-β-turn conformations. NOEs involving Cβ and Cγ protons are particularly sensitive to the state of pyrrolidine ring puckering.

Item Type: Journal Article
Additional Information: Copyright of this article belongs to UOCHB.
Department/Centre: Division of Biological Sciences > Molecular Biophysics Unit
Date Deposited: 01 Sep 2010 04:30
Last Modified: 01 Sep 2010 04:30
URI: http://eprints.iisc.ernet.in/id/eprint/31596

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