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SSEP-2.0: Secondary Structural Elements of Proteins

Balamurugan, B and Mohan, Samaya K and Ramesh, J and Roshan, Md MNA and Sumathi, K and Sekar, K (2005) SSEP-2.0: Secondary Structural Elements of Proteins. In: Acta Crystallographica Section D-Biological Crystallography, 61 . pp. 634-636.

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Abstract

The Secondary Structural Elements of Proteins (SSEP) database is an integrated and comprehensive knowledge base for accessing information related to all the secondary-structural elements present in non-redundant ( 25 and 90%) protein chains. The new version 2.0 of the database contains 2485 and 8595 protein chains from the 25 and 90%non-redundant data sets, respectively. The necessary web interfaces have been developed that enable users to visualize the three-dimensional structure of the secondary-structural element in the client machine using the free molecular-visualization program RASMOL.This source is updated at regular intervals and can be accessed through the bioinformatics web server at the URL http:// cluster. physics.iisc. ernet. in/ ssep or http:// 144.16.71.148/ ssep/.

Item Type: Journal Article
Additional Information: Copyright for this article belongs to Blackwell Munksguaard.
Department/Centre: Division of Information Sciences > Supercomputer Education & Research Centre
Division of Information Sciences > BioInformatics Centre
Date Deposited: 07 Jun 2005
Last Modified: 19 Sep 2010 04:19
URI: http://eprints.iisc.ernet.in/id/eprint/3289

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