# Ternary Copper Complexes for Photocleavage of DNA by Red Light: Direct Evidence for Sulfur-to-Copper Charge Transfer and d-d Band Involvement

Dhar, Shanta and Senapati, Dulal and Das, Puspendu K and Chattopadhyay, Pabitra and Nethaji, Munirathinam and Chakravarty, Akhil R (2003) Ternary Copper Complexes for Photocleavage of DNA by Red Light: Direct Evidence for Sulfur-to-Copper Charge Transfer and d-d Band Involvement. In: The Journal of the American Chemical Society, 125 (40). pp. 12118-12124.

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## Abstract

A new class of ternary copper(II) complexes of formulation $[Cu(L^n)B](ClO_4)$ (1-4), where $HL^n$ is a NSO-donor Schiff base $(HL^1, HL^2)$ and B is a NN-donor heterocyclic base viz. 1,10-phenanthroline (phen) and 2,9-dimethyl-1,10-phenanthroline (dmp), are prepared, structurally characterized, and their DNA binding and photocleavage activities studied in the presence of red light. Ternary complex $[Cu(L^3)(phen)](ClO_4)$ (5) containing an ONO-donor Schiff base and a binary complex $[Cu(L^2)_2]$ (6) are also prepared and structurally characterized for mechanistic investigations of the DNA cleavage reactions. While 1-4 have a square pyramidal (4 + 1) $CuN_3OS$ coordination geometry with the Schiff base bonded at the equatorial sites, 5 has a square pyramidal (4 + 1) geometry with $CuN_3O_2$ coordination with the alcoholic oxygen at the axial site, and 6 has a square planar trans-$CuN_2O_2$ geometry. Binding of the complexes 1-4 to calf thymus DNA shows the relative order: phen >> dmp. Mechanistic investigations using distamycin reveal minor groove binding for the complexes. The phen complexes containing the Schiff base with a thiomethyl or thiophenyl moiety show red light induced photocleavage. The dmp complexes are essentially photonuclease inactive. Complexes 5 and 6 are cleavage inactive under similar photolytic conditions. A $10 \mu M$ solution of 1 displays a 72% cleavage of SC DNA $(0.5 \mu g)$ on an exposure of 30 min using a 603 nm Nd:YAG pulsed laser (60 mJ/P) in Tris-HCl buffer (pH 7.2). Significant cleavage of 1 is also observed at 694 nm using a Ruby laser. Complex 1 is cleavage inactive under argon or nitrogen atmosphere. It shows a more enhanced cleavage in pure oxygen than in air. Enhancement of cleavage in $D_2O$ and inhibition with sodium azide addition indicate the possibility of the formation of singlet oxygen as a reactive intermediate leading to DNA cleavage. The d-d band excitation with red light shows significant enhancement of cleavage yield. The results indicate that the phen ligand is necessary for DNA binding of the complex. Both the sulfur-to-copper charge transfer band and copper d-d band excitations helped the DNA cleavage. While the absorption of a red photon induces a metal d-d transition, excitation at shorter visible wavelengths leads to the sulfur-to-copper charge transfer band excitation at the initial step of photocleavage. The excitation energy is subsequently transferred to ground state oxygen molecules to produce singlet oxygen that cleaves the DNA.

Item Type: Journal Article The Copyright belongs to American Chemical Society. Division of Chemical Sciences > Inorganic & Physical Chemistry 19 May 2006 19 Sep 2010 04:26 http://eprints.iisc.ernet.in/id/eprint/6746